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TUCS Short Courses

Stochastic Biomodelling

Stochastic biomodelling Lecturer: Andrzej Mizera   Content   Introduction Stochasticity in biological processes Prerequisite Crash course on probability theory Stochastic modelling of chemical kinetics The chemical master equation (CME) Stochastic simulation of the CME Gillespie’s direct method algorithm Practicals Implementing the Gillespie’s algorithm in Matlab and demonstrating its characteristics on various biochemical systems; comparing the obtained simulation results …